Gene detail information of Glyur006575s00044530 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G61190.1 | 5.00E-07 | LRR and NB-ARC domains-containing disease resistance protein |
| NR | KEH17602.1 | 8.21E-77 | Rpp4, putative [Medicago truncatula] |
| Swissprot | tr|O22727|DRL16_ARATH | 2.00E-07 | Probable disease resistance protein At1g61190 |
| trEMBL | tr|A0A072TJK4|A0A072TJK4_MEDTR | 3.00E-77 | Rpp4, putative {ECO:0000313|EMBL:KEH17602.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06575 | 4818 | 5477 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 25.923 |
| SRR1783600 | control | 25.558 |
| SRR1783602 | moderate drought stress | 30.520 |
| SRR1811619 | moderate drought stress | 25.410 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.508 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.094 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.183 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.165 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.314 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.186 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.736 |
| SRR2868004 | Drought Stress (root) | 8.733 |
| SRR2967015 | Control (root) | 9.658 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 9.474 |
| SRR9715740 | Leaf | 2.518 |
| SRR9715741 | Leaf | 5.725 |
| SRR9715739 | Root | 0.424 |
| SRR9715742 | Root | 1.074 |
| SRR9715743 | Root | 0.738 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 6.383 |
| SRR8400027 | Control - Root | 1.146 |