Gene detail information of Glyur006575s00044529 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G44630.3 | 5.00E-04 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | KEH39057.1 | 0 | disease resistance protein (CC-NBS-LRR class) family protein [Medicago truncatula] |
| trEMBL | tr|A0A072VB85|A0A072VB85_MEDTR | 0 | Disease resistance protein (CC-NBS-LRR class) family protein {ECO:0000313|EMBL:KEH39057.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06575 | 656 | 5189 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.278 |
| SRR1783600 | control | 4.431 |
| SRR1783602 | moderate drought stress | 5.190 |
| SRR1811619 | moderate drought stress | 5.051 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.242 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.877 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.894 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.739 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.059 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.954 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.322 |
| SRR2868004 | Drought Stress (root) | 3.618 |
| SRR2967015 | Control (root) | 3.473 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.618 |
| SRR9715740 | Leaf | 1.481 |
| SRR9715741 | Leaf | 2.362 |
| SRR9715739 | Root | 0.074 |
| SRR9715742 | Root | 1.119 |
| SRR9715743 | Root | 0.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.001 |
| SRR8400027 | Control - Root | 0.506 |