Gene detail information of Glyur006527s00045482 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G28790.1 | 3.00E-21 | Pathogenesis-related thaumatin superfamily protein |
| NR | XP_003538000.1 | 3.68E-29 | PREDICTED: osmotin-like protein-like [Glycine max] |
| Swissprot | tr|Q41350|OLP1_SOLLC | 3.00E-27 | Osmotin-like protein (Precursor) |
| trEMBL | tr|I1LK37|I1LK37_SOYBN | 1.00E-29 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G14970.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06527 | 4402 | 4611 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006527s00045482.1 | PF00314.12 | Thaumatin | 3 | 69 | 2.00E-25 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 39.365 |
| SRR1783600 | control | 26.084 |
| SRR1783602 | moderate drought stress | 11.761 |
| SRR1811619 | moderate drought stress | 7.174 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.499 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 18.321 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 5.810 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 9.253 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 9.719 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.011 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.228 |
| SRR2868004 | Drought Stress (root) | 4.686 |
| SRR2967015 | Control (root) | 10.490 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 13.769 |
| SRR9715740 | Leaf | 0.406 |
| SRR9715741 | Leaf | 0.902 |
| SRR9715739 | Root | 127.198 |
| SRR9715742 | Root | 27.488 |
| SRR9715743 | Root | 50.869 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.587 |
| SRR8749028 | MeJA induced 9h | 0.387 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.540 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 40.737 |
| SRR8400027 | Control - Root | 42.753 |