Gene detail information of Glyur006522s00045679 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G47980.1 | 1.00E-75 | |
| NR | XP_003546306.2 | 8.20E-117 | PREDICTED: desiccation-related protein PCC13-62-like [Glycine max] |
| Swissprot | tr|P22242|DRPE_CRAPL | 3.00E-85 | Desiccation-related protein PCC13-62 (Precursor) |
| trEMBL | tr|K7MB89|K7MB89_SOYBN | 3.00E-117 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G14720.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06522 | 1125 | 2111 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006522s00045679.1 | PF13668.1 | Ferritin_2 | 11 | 108 | 1.00E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 41.428 |
| SRR1783600 | control | 40.178 |
| SRR1783602 | moderate drought stress | 26.970 |
| SRR1811619 | moderate drought stress | 24.851 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.496 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.945 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 41.641 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 37.622 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.066 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.207 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.116 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.162 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 89.233 |
| SRR2868004 | Drought Stress (root) | 34.272 |
| SRR2967015 | Control (root) | 25.284 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.008 |
| SRR9715740 | Leaf | 0.552 |
| SRR9715741 | Leaf | 0.760 |
| SRR9715739 | Root | 126.676 |
| SRR9715742 | Root | 169.941 |
| SRR9715743 | Root | 173.892 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.553 |
| SRR8749028 | MeJA induced 9h | 45.464 |
| SRR8749029 | MeJA induced 9h | 8.228 |
| SRR8749030 | Uninduced | 29.276 |
| SRR8749031 | Uninduced | 4.093 |
| SRR8749032 | Uninduced | 9.385 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 160.034 |
| SRR8400027 | Control - Root | 119.880 |