Gene detail information of Glyur006513s00040507 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G37030.1 | 0 | |
| NR | XP_003638145.1 | 0 | Membrane protein, putative [Medicago truncatula] |
| Swissprot | tr|Q8GUM4|Y3739_ARATH | 9.00E-129 | Uncharacterized membrane protein At3g27390 |
| trEMBL | tr|G8A334|G8A334_MEDTR | 0 | Membrane protein, putative {ECO:0000313|EMBL:AES85872.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06513 | 178 | 3867 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.153 |
| SRR1783600 | control | 1.230 |
| SRR1783602 | moderate drought stress | 1.427 |
| SRR1811619 | moderate drought stress | 1.514 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.580 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.563 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.878 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.335 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.969 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.092 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.213 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.249 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 27.508 |
| SRR2868004 | Drought Stress (root) | 40.254 |
| SRR2967015 | Control (root) | 29.970 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.680 |
| SRR9715740 | Leaf | 0.656 |
| SRR9715741 | Leaf | 0.601 |
| SRR9715739 | Root | 2.998 |
| SRR9715742 | Root | 5.693 |
| SRR9715743 | Root | 4.176 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 12.167 |
| SRR8749028 | MeJA induced 9h | 17.033 |
| SRR8749029 | MeJA induced 9h | 16.525 |
| SRR8749030 | Uninduced | 16.094 |
| SRR8749031 | Uninduced | 31.960 |
| SRR8749032 | Uninduced | 21.309 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 14.774 |
| SRR8400027 | Control - Root | 10.993 |