Gene detail information of Glyur006512s00044150.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G44940.1 | 3.00E-19 | Integrase-type DNA-binding superfamily protein |
| NR | XP_003521085.1 | 3.20E-41 | PREDICTED: ethylene-responsive transcription factor ERF034-like [Glycine max] |
| Swissprot | tr|Q8LBQ7|ERF34_ARATH | 1.00E-30 | Ethylene-responsive transcription factor ERF034 |
| trEMBL | tr|I1JMV1|I1JMV1_SOYBN | 1.00E-41 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA03G27050.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06512 | 2056 | 3184 | + |
Gene family
| Gene family | subfamily |
|---|---|
| Transcription Factors Family | ERF |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006512s00044150.1 | PF00847.15 | AP2 | 84 | 134 | 1.30E-15 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.332 |
| SRR1783600 | control | 0.306 |
| SRR1783602 | moderate drought stress | 0.553 |
| SRR1811619 | moderate drought stress | 0.622 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.418 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.228 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.503 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.320 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.125 |
| SRR2868004 | Drought Stress (root) | 0.019 |
| SRR2967015 | Control (root) | 0.046 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.204 |
| SRR9715740 | Leaf | 0.544 |
| SRR9715741 | Leaf | 2.121 |
| SRR9715739 | Root | 0.063 |
| SRR9715742 | Root | 2.642 |
| SRR9715743 | Root | 1.439 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.298 |
| SRR8749028 | MeJA induced 9h | 0.632 |
| SRR8749029 | MeJA induced 9h | 0.119 |
| SRR8749030 | Uninduced | 0.092 |
| SRR8749031 | Uninduced | 0.091 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.177 |
| SRR8400027 | Control - Root | 0.227 |