Gene detail information of Glyur006449s00044472 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G23640.2 | 7.00E-47 | heteroglycan glucosidase 1 |
| NR | XP_004512368.1 | 6.50E-64 | PREDICTED: alpha-glucosidase 2-like isoform X2 [Cicer arietinum] |
| trEMBL | tr|A0A072UDG9|A0A072UDG9_MEDTR | 2.00E-63 | Neutral alpha-glucosidase {ECO:0000313|EMBL:KEH27672.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06449 | 3485 | 5507 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.775 |
| SRR1783600 | control | 5.612 |
| SRR1783602 | moderate drought stress | 11.634 |
| SRR1811619 | moderate drought stress | 12.050 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 14.038 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 13.810 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.581 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.890 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.348 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 9.906 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.966 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 9.923 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.655 |
| SRR2868004 | Drought Stress (root) | 13.535 |
| SRR2967015 | Control (root) | 8.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.260 |
| SRR9715740 | Leaf | 0.284 |
| SRR9715741 | Leaf | 0.193 |
| SRR9715739 | Root | 0.065 |
| SRR9715742 | Root | 0.244 |
| SRR9715743 | Root | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.047 |
| SRR8749028 | MeJA induced 9h | 0.041 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.084 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.225 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.520 |
| SRR8400027 | Control - Root | 0.426 |