Gene detail information of Glyur006427s00046875 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G08290.1 | 4.00E-13 | nodulin MtN21 /EamA-like transporter family protein |
| NR | XP_004500563.1 | 1.82E-60 | PREDICTED: WAT1-related protein At4g08290-like [Cicer arietinum] |
| Swissprot | tr|Q9SUF1|WTR31_ARATH | 2.00E-26 | WAT1-related protein At4g08290 |
| trEMBL | tr|G7J315|G7J315_MEDTR | 1.00E-47 | Nodulin MtN21/EamA-like transporter family protein {ECO:0000313|EMBL:AES71308.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06427 | 213 | 1892 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.284 |
| SRR1783600 | control | 1.029 |
| SRR1783602 | moderate drought stress | 1.253 |
| SRR1811619 | moderate drought stress | 1.059 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.079 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 10.827 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.180 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.133 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 36.995 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 32.576 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.126 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.116 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 10.870 |
| SRR2868004 | Drought Stress (root) | 13.022 |
| SRR2967015 | Control (root) | 15.836 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.493 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 3.551 |
| SRR9715742 | Root | 6.310 |
| SRR9715743 | Root | 3.812 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.745 |
| SRR8749028 | MeJA induced 9h | 0.382 |
| SRR8749029 | MeJA induced 9h | 0.455 |
| SRR8749030 | Uninduced | 4.947 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 4.158 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.230 |
| SRR8400027 | Control - Root | 0.902 |