Gene detail information of Glyur006419s00045268 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G41550.1 | 8.00E-08 | Disease resistance protein (TIR-NBS-LRR class) family |
| NR | AES96527.2 | 4.61E-94 | disease resistance protein [Medicago truncatula] |
| trEMBL | tr|G7K9Q6|G7K9Q6_MEDTR | 2.00E-94 | Disease resistance protein {ECO:0000313|EMBL:AES96527.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06419 | 1102 | 2549 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.429 |
| SRR1783600 | control | 0.453 |
| SRR1783602 | moderate drought stress | 0.530 |
| SRR1811619 | moderate drought stress | 0.859 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.298 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.053 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.476 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.391 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 26.023 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 27.359 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.295 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.382 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.005 |
| SRR2868004 | Drought Stress (root) | 4.779 |
| SRR2967015 | Control (root) | 2.518 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.993 |
| SRR9715740 | Leaf | 3.335 |
| SRR9715741 | Leaf | 1.285 |
| SRR9715739 | Root | 1.583 |
| SRR9715742 | Root | 3.244 |
| SRR9715743 | Root | 1.826 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.192 |
| SRR8749028 | MeJA induced 9h | 8.030 |
| SRR8749029 | MeJA induced 9h | 7.692 |
| SRR8749030 | Uninduced | 4.115 |
| SRR8749031 | Uninduced | 1.339 |
| SRR8749032 | Uninduced | 1.814 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.898 |
| SRR8400027 | Control - Root | 5.902 |