Gene detail information of Glyur006413s00043380 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G64170.1 | 9.00E-22 | dentin sialophosphoprotein-related |
| NR | KHN39217.1 | 0 | hypothetical protein glysoja_028022 [Glycine soja] |
| trEMBL | tr|K7L5E9|K7L5E9_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA08G07816.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06413 | 2649 | 5819 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.371 |
| SRR1783600 | control | 5.485 |
| SRR1783602 | moderate drought stress | 6.868 |
| SRR1811619 | moderate drought stress | 6.885 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 9.225 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 9.286 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.428 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 19.977 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.984 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.925 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.819 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.734 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.929 |
| SRR2868004 | Drought Stress (root) | 12.140 |
| SRR2967015 | Control (root) | 7.749 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 32.944 |
| SRR9715740 | Leaf | 43.141 |
| SRR9715741 | Leaf | 43.195 |
| SRR9715739 | Root | 0.479 |
| SRR9715742 | Root | 4.880 |
| SRR9715743 | Root | 3.378 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.524 |
| SRR8749028 | MeJA induced 9h | 12.461 |
| SRR8749029 | MeJA induced 9h | 16.521 |
| SRR8749030 | Uninduced | 11.201 |
| SRR8749031 | Uninduced | 14.861 |
| SRR8749032 | Uninduced | 15.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.115 |
| SRR8400027 | Control - Root | 1.248 |