Gene detail

Gene detail information of Glyur006401s00045156.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G19250.1	5.00E-92	flavin-dependent monooxygenase 1
NR	XP_007199652.1	0	hypothetical protein PRUPE_ppa004389mg [Prunus persica]
COG	YP_007059321.1	1.00E-55	K+ transport protein [Rivularia sp. PCC 7116]
Swissprot	tr\|Q9LMA1\|FMO1_ARATH	2.00E-118	Probable flavin-containing monooxygenase 1
trEMBL	tr\|M5VJ80\|M5VJ80_PRUPE	0	Uncharacterized protein {ECO:0000313\|EMBL:EMJ00851.1}

Sequence

Transcript Sequence

>Glyur006401s00045156.1
CCACCGACTAGTTATATGATAAAAGGAAGGAAAAAAAAATCTGTATCCCTATCCATCCATTCCGTATAGGTAAGGTAAGGTAAGGGGATTGCAATGAAGAGGGGGAGGGAGAGGGAAGTGGGCATCATAGGAGCGGGCATCAGTGGCCTCCTGGCGTGCAAGTACATCCGAGCAAAGGGCTTCCATCCAATAGTTTTTGAGGCCAAGAGCAGCATCGGAGGATTATGGACCAAAACCTTGGACACCACCAAACTCCAAACCCCCAAACCATTGTTTCAGTTCTCAGATTTTCCATGGCCATCTTCTGTCACCGAAGACTTCCCCGACCAGCATCAGGTGCTGGGTTACATCACCGCTTACGCACACCACTTTGACCTGCTCAAGCACATCAAGTTCAATACCCTCGTCCAAGGAATCGANTATGAAGGCCCTGCTGTTGAGGAGATGCAGGCGTGGCATCTTTGGGGCGGAACAGGTCACCCTTTCAGCTCCAGAGGAAAATGGACCCTTTCCCTCAAAAATACCCAAAACCATTCAGCTGCGCCTCATCAGGTGTATACAGTGGATTTTGTGGTTCTGTGCATAGGTCGGTTCAGTGATGTCCCNAACATTCCAGAATTTCCTCCAAACAAAGGCCCGGAAGTGTTTGGAGGGAAGGTGATACACTCCATGGACTATGCCTACATGGAGGATGCAGCCCAGTTCGTGAAAGGGAAGCAAGTCGCCATCGTTGGATCACAGAAATCCGCTCTAGACATCGCAATGGAGTGCTCAGCACTCAACGGGGTTAAGCATCCCTGTAGAATCCTATACAGGACAGAACACTGGAACCTTCCAGACTACCTTCCGTGGGGCATACCCCTGGCTTTTTTGTACCTCAATCGTTTCTCTGAACTCATGGTTCATAAGCCCGGCGAAGGCTTCCTGCTCAGTCTCCTTGCCACTCTTCTTGCACCTCTGGTTGGATTGAGAAAGTATGGGATGGTGCCAAATCATAGCTTTCATCAGGAATTCAGTTCTTGTACGTTCTCATCGCTGCCTGAGAAATTCTATGACAGAGTCGAAGAGGGGAGTATCATATTGAAGAAAGCGCCGAGGTTTTGGTTCTGCAGAGAGGGCGTTATGGTCGATGGAGAGGTCGAACCTCTCAAGACTGATTTGGTGATATTAGCTACCGGGTTCAGCGGTGACAAGAAGCTCAGAGACATGTTTGTGTCTTCCACNTTTCGAAACCTTATAGCGGCCTCTCCACATGCAACCCTTCCACTATATAGGGAATGCATACACCCCCAGATTCCACAAGTGGCGGTGATTGGGTTCTCGGAGAGTGCTTCCAATCTGTACACCTCGGAGATGAGGTGCCGTTGGGTTGCGGAGCTTCTGGATGGGACGTTCCAACTGCCAGAGGTGGGGGCGATGAAGAGAGAGGCGGAGGAGTGGGAGGAATACAGGAAGAGATACGCGGGGGAGTACCACCGGAGGTATTGCATAGCTTCCTTGCACATATGGTACAACGATCAACTCTGCAGGGACATGCGATGGAACCCCCGAAGAAAAAAGGGACTCCTTGCTGACCTCTTTCTTCCTTATGGCCCTTTGGATTATTCTTCTCCTCCTTAATCCATACGCTATGCACATCCTCTGTGATCGAGTGAAATGCACGTGCGTTTCACTATTTTGAGAATAAGTTCTACGTATATTTCACTCAACAATCGCAAAGGGGGTAGAATTCTCTTTATTTTTTTTATTATGATGTTTTTT

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold06401	3409	5908	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
K00485	FMO	EC:1.14.13.8	Drug metabolism - cytochrome P450	map00982

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0004499 N,N-dimethylaniline monooxygenase activity

GO:0050660 flavin adenine dinucleotide binding

GO:0050661 NADP binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006401s00045156.1	PF00743.14	FMO-like	7	484	1.90E-36

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	4.134
SRR1783600	control	3.930
SRR1783602	moderate drought stress	23.510
SRR1811619	moderate drought stress	23.570

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	9.803
DRR006520	Root Summer glycyrrhizin high producing strain	10.140
DRR006521	Root Winter glycyrrhizin high producing strain	27.785
DRR006522	Root Winter glycyrrhizin high producing strain	28.261
DRR006523	Root Summer glycyrrhizin low producing strain	5.877
DRR006524	Root Summer glycyrrhizin low producing strain	5.763
DRR006525	Leaf Summer glycyrrhizin high producing strain	39.052
DRR006526	Leaf Summer glycyrrhizin high producing strain	37.932

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	1.082
SRR2868004	Drought Stress (root)	1.512
SRR2967015	Control (root)	1.597

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	41.354
SRR9715740	Leaf	63.378
SRR9715741	Leaf	43.646
SRR9715739	Root	11.187
SRR9715742	Root	7.760
SRR9715743	Root	6.259

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	0.330
SRR8749028	MeJA induced 9h	3.562
SRR8749029	MeJA induced 9h	0.294
SRR8749030	Uninduced	2.097
SRR8749031	Uninduced	1.181
SRR8749032	Uninduced	1.641

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	9.766
SRR8400027	Control - Root	9.049