Gene detail information of Glyur006397s00044511 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G38200.1 | 3.00E-96 | SEC7-like guanine nucleotide exchange family protein |
| NR | KHN29890.1 | 0 | Brefeldin A-inhibited guanine nucleotide-exchange protein 2 [Glycine soja] |
| Swissprot | tr|F4JSZ5|BIG1_ARATH | 1.00E-109 | Brefeldin A-inhibited guanine nucleotide-exchange protein 1 |
| trEMBL | tr|K7KBU2|K7KBU2_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G48200.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06397 | 1524 | 4954 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.506 |
| SRR1783600 | control | 1.509 |
| SRR1783602 | moderate drought stress | 1.619 |
| SRR1811619 | moderate drought stress | 1.156 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.011 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.887 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 2.482 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.141 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.991 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.107 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.703 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.263 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 3.738 |
| SRR2868004 | Drought Stress (root) | 3.286 |
| SRR2967015 | Control (root) | 3.343 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.411 |
| SRR9715740 | Leaf | 1.311 |
| SRR9715741 | Leaf | 1.608 |
| SRR9715739 | Root | 0.323 |
| SRR9715742 | Root | 2.021 |
| SRR9715743 | Root | 1.345 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.131 |
| SRR8749028 | MeJA induced 9h | 1.429 |
| SRR8749029 | MeJA induced 9h | 0.346 |
| SRR8749030 | Uninduced | 0.351 |
| SRR8749031 | Uninduced | 0.112 |
| SRR8749032 | Uninduced | 0.163 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.997 |
| SRR8400027 | Control - Root | 2.297 |