Gene detail information of Glyur006385s00046004 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G29950.1 | 5.00E-19 | ELF4-like 1 |
| NR | XP_003544885.1 | 1.62E-52 | PREDICTED: protein ELF4-LIKE 1-like isoform X1 [Glycine max] |
| Swissprot | tr|O80877|EF4L1_ARATH | 7.00E-24 | Protein ELF4-LIKE 1 |
| trEMBL | tr|K7M812|K7M812_SOYBN | 6.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G37280.4} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06385 | 3418 | 5903 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006385s00046004.1 | PF07011.6 | DUF1313 | 38 | 121 | 4.60E-30 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.800 |
| SRR1783600 | control | 12.187 |
| SRR1783602 | moderate drought stress | 6.235 |
| SRR1811619 | moderate drought stress | 6.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.934 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 6.711 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 42.118 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 40.294 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 22.616 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 22.950 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.589 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.543 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.236 |
| SRR2868004 | Drought Stress (root) | 2.160 |
| SRR2967015 | Control (root) | 5.417 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.530 |
| SRR9715740 | Leaf | 0.929 |
| SRR9715741 | Leaf | 0.522 |
| SRR9715739 | Root | 2.511 |
| SRR9715742 | Root | 1.985 |
| SRR9715743 | Root | 2.472 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 16.617 |
| SRR8749028 | MeJA induced 9h | 5.698 |
| SRR8749029 | MeJA induced 9h | 9.247 |
| SRR8749030 | Uninduced | 9.823 |
| SRR8749031 | Uninduced | 5.939 |
| SRR8749032 | Uninduced | 8.092 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 8.046 |
| SRR8400027 | Control - Root | 8.144 |