Gene detail information of Glyur006375s00045155


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT2G32060.32.00E-50Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein
NRXP_007135811.12.47E-86hypothetical protein PHAVU_010G160500g [Phaseolus vulgaris]
COGYP_006363103.11.00E-0950S ribosomal protein L7Ae [Thermogladius cellulolyticus 1633]
Swissprottr|Q9XHS0|RS12_HORVU1.00E-7240S ribosomal protein S12
trEMBLtr|V7AR71|V7AR71_PHAVU9.00E-8740S ribosomal protein S12 {ECO:0000256|RuleBase:RU000670}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold063751331933+


Gene family

Gene familysubfamily
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KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
----------


Gene Ontology

biological_process

GO:0006412  translation


cellular_component

GO:0005622  intracellular

GO:0005840  ribosome


molecular_function

GO:0003735  structural constituent of ribosome

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Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur006375s00045155.1PF01248.21Ribosomal_L7Ae291221.80E-27


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control277.838
SRR1783600control310.930
SRR1783602moderate drought stress384.787
SRR1811619moderate drought stress380.748

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain586.785
DRR006520Root Summer glycyrrhizin high producing strain572.464
DRR006521Root Winter glycyrrhizin high producing strain203.546
DRR006522Root Winter glycyrrhizin high producing strain192.899
DRR006523Root Summer glycyrrhizin low producing strain401.253
DRR006524Root Summer glycyrrhizin low producing strain385.201
DRR006525Leaf Summer glycyrrhizin high producing strain85.119
DRR006526Leaf Summer glycyrrhizin high producing strain87.117

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)400.251
SRR2868004Drought Stress (root)344.255
SRR2967015Control (root)342.242

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf98.994
SRR9715740Leaf98.464
SRR9715741Leaf104.175
SRR9715739Root582.949
SRR9715742Root302.981
SRR9715743Root355.018

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h927.319
SRR8749028MeJA induced 9h479.562
SRR8749029MeJA induced 9h596.116
SRR8749030Uninduced113.136
SRR8749031Uninduced70.778
SRR8749032Uninduced157.287

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root387.726
SRR8400027Control - Root357.172

© 2021 Resource Institute for Chinese & Ethnic Materia Medica, Guizhou University of Traditional Chinese Medicine
State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved