Gene detail information of Glyur006359s00047467 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G02220.1 | 2.00E-07 | |
| NR | XP_007140516.1 | 2.58E-23 | hypothetical protein PHAVU_008G119300g [Phaseolus vulgaris] |
| trEMBL | tr|V7B4K3|V7B4K3_PHAVU | 1.00E-23 | Uncharacterized protein {ECO:0000313|EMBL:ESW12510.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06359 | 2203 | 2397 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.751 |
| SRR1783600 | control | 3.442 |
| SRR1783602 | moderate drought stress | 0.215 |
| SRR1811619 | moderate drought stress | 0.288 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 24.024 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.241 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.312 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 33.323 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 50.259 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 3.708 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.884 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 20.283 |
| SRR2868004 | Drought Stress (root) | 17.152 |
| SRR2967015 | Control (root) | 17.405 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 362.509 |
| SRR9715740 | Leaf | 111.798 |
| SRR9715741 | Leaf | 269.553 |
| SRR9715739 | Root | 241.366 |
| SRR9715742 | Root | 157.503 |
| SRR9715743 | Root | 176.652 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 130.325 |
| SRR8749028 | MeJA induced 9h | 67.543 |
| SRR8749029 | MeJA induced 9h | 94.176 |
| SRR8749030 | Uninduced | 30.971 |
| SRR8749031 | Uninduced | 11.234 |
| SRR8749032 | Uninduced | 49.191 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 19.881 |
| SRR8400027 | Control - Root | 41.916 |