Gene detail

Gene detail information of Glyur006285s00044711

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT1G15060.1	4.00E-148	Uncharacterised conserved protein UCP031088, alpha/beta hydrolase
NR	XP_004497043.1	0	PREDICTED: uncharacterized protein LOC101511016 isoform X1 [Cicer arietinum]
COG	YP_006440644.1	5.00E-16	alpha/beta hydrolase fold containing protein [Turneriella parva DSM 21527]
trEMBL	tr\|K7N313\|K7N313_SOYBN	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA20G25590.2}

Sequence

Transcript Sequence

>Glyur006285s00044711.1
ATGCTGCAGTCGTCATTTGCACGTTACATGTCTGGTCAGGGATTTGAAACTTGGATTCTTGAAGTACGGGGAGCTGGGTTGAGTCTTCAGGGTTCAAATTCCAAAGATATTGAACAGTCTGCCCATGCAATGTCTGAGAAGATGGAAGATGCTTTAGAAAGTACAATCAATGGAGCCGTGTCTTCAAAAACAGAATTGAATAACATATCTTGTGCAGTATCTGAACCTGACATTGCTGCCTCAAAAGGAGATGAAACTAAGAATGTGGCTGGCAATGGAGACCTGAATCGGTTAGCTACTGTTTGGGATGAATCAAAGTTAGTGGCAAGGTTGTCTGAGACTTTTATGCGTTTGTCAGAAAGAGTCTCTGGGTTTCTTAGTGAAAGTCAATCAAAGGTCATGTCTGCCAAATTACTTGATCAGATTTCAAAACTTTTGGTGGATTCCCCATTATATGAACAATTCAATGAGGTAAGGGGAAAGCTTGCAACTTTGTTGGAAACAAGACAAAACTCTGGTATTACTAGTCAAATAACTGATCTGAGTCAAAAGCTAGTAGATATTATTGAGGCAGGTCAGCTATCCGTTTCTCCTCCATTATTTGATCTACAAACCCGCTTTACTTCTACAGTAGAAGATTTTCAGAAGCAACTTGACTTGGTAGTGAAGTACAATTGGGACTTTGATCATTACCTGGAAGAAGATGTTCCTGCAGCGATAGAATACATTATGAAACAAAGCAAATCAAAAGATGGAAAATTGCTTGCAATTGGACACTCAATGGGTGGTATCTTGCTTTATTCAATGCTGTCACGGTATGGTTTTGAAGGAAAAGAACCCAGACTGGCTGCAGTAGTTACACTGGCATCATCTCTGGACTACACCCCATCCAAATCAACTTTGAAGTTACTCTTACCCCTTGCAGATCCTGCACAGGCTCTGAATGTCCCTGTTGTTCCTTTAGGGGCAATGTTATCAGCAGCTTATGAGCTCACAACAGCATTTCGTAAGCGTGGTTTATGTAATAGGAATGGGACCTTTTTTTACAAGGACCATCTACACAAAACCAATATACCTATTTTAGCTATTGCTGGAGACGAGGATCTGATTTGCCCACCTGAAGCAGTTGAAGCAGAAACCGTTAAACTAATTCCTAAGCACCTGGTTACCTATAAAGTTTTTGGAGAACCCAAAGGCCCACATTATGCTCATTATGATTTGGTTGGAGGAAGACTGGCAGTGGAGCAGGTATATCCCTGTATTATTGAATTTCTTAGTTGTCACGACAAGTAA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold06285	621	3823	-

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

molecular_function
GO:0004252 serine-type endopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006285s00044711.1	PF12697.2	Abhydrolase_6	233	390	1.30E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	1.950
SRR1783600	control	2.023
SRR1783602	moderate drought stress	2.427
SRR1811619	moderate drought stress	2.238

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.075
DRR006520	Root Summer glycyrrhizin high producing strain	1.838
DRR006521	Root Winter glycyrrhizin high producing strain	1.603
DRR006522	Root Winter glycyrrhizin high producing strain	1.295
DRR006523	Root Summer glycyrrhizin low producing strain	2.953
DRR006524	Root Summer glycyrrhizin low producing strain	3.027
DRR006525	Leaf Summer glycyrrhizin high producing strain	5.529
DRR006526	Leaf Summer glycyrrhizin high producing strain	5.909

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.809
SRR2868004	Drought Stress (root)	10.209
SRR2967015	Control (root)	6.190

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	27.019
SRR9715740	Leaf	16.095
SRR9715741	Leaf	28.279
SRR9715739	Root	0.547
SRR9715742	Root	2.833
SRR9715743	Root	2.382

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	8.348
SRR8749028	MeJA induced 9h	13.792
SRR8749029	MeJA induced 9h	17.982
SRR8749030	Uninduced	38.705
SRR8749031	Uninduced	106.977
SRR8749032	Uninduced	38.655

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	6.011
SRR8400027	Control - Root	3.782