Gene detail information of Glyur006247s00046289 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G13950.1 | 5.00E-05 | |
| NR | XP_004510422.1 | 2.31E-13 | PREDICTED: uncharacterized protein LOC101494327 [Cicer arietinum] |
| trEMBL | tr|I3SLC6|I3SLC6_LOTJA | 1.00E-13 | Uncharacterized protein {ECO:0000313|EMBL:AFK41068.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06247 | 2315 | 2850 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006247s00046289.1 | PF13962.1 | PGG | 26 | 81 | 1.50E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 118.893 |
| SRR1783600 | control | 123.381 |
| SRR1783602 | moderate drought stress | 3.924 |
| SRR1811619 | moderate drought stress | 3.728 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 23.659 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 24.493 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.836 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.420 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.613 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 21.457 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.313 |
| SRR2868004 | Drought Stress (root) | 0.315 |
| SRR2967015 | Control (root) | 1.110 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.799 |
| SRR9715740 | Leaf | 2.102 |
| SRR9715741 | Leaf | 6.109 |
| SRR9715739 | Root | 33.458 |
| SRR9715742 | Root | 70.914 |
| SRR9715743 | Root | 69.419 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.110 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 31.085 |
| SRR8400027 | Control - Root | 41.422 |