Gene detail information of Glyur006181s00044613 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G58530.1 | 4.00E-39 | Glutaredoxin family protein |
| NR | XP_004491017.1 | 1.14E-134 | PREDICTED: uncharacterized protein At5g39865-like [Cicer arietinum] |
| COG | YP_002526952.1 | 6.00E-06 | glutaredoxin 3 [Rhodobacter sphaeroides KD131] |
| Swissprot | tr|Q9FLE8|Y5986_ARATH | 5.00E-37 | Uncharacterized protein At5g39865 |
| trEMBL | tr|K7KAW7|K7KAW7_SOYBN | 2.00E-132 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA02G43140.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06181 | 539 | 1306 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006181s00044613.1 | PF00462.19 | Glutaredoxin | 106 | 172 | 1.10E-11 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 11.072 |
| SRR1783600 | control | 10.254 |
| SRR1783602 | moderate drought stress | 8.921 |
| SRR1811619 | moderate drought stress | 9.137 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 12.586 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 12.188 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 20.873 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 20.261 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 10.949 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 8.546 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.342 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.177 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.638 |
| SRR2868004 | Drought Stress (root) | 5.505 |
| SRR2967015 | Control (root) | 6.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 2.352 |
| SRR9715740 | Leaf | 2.808 |
| SRR9715741 | Leaf | 3.108 |
| SRR9715739 | Root | 21.925 |
| SRR9715742 | Root | 16.368 |
| SRR9715743 | Root | 17.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 34.475 |
| SRR8749028 | MeJA induced 9h | 36.692 |
| SRR8749029 | MeJA induced 9h | 48.795 |
| SRR8749030 | Uninduced | 10.637 |
| SRR8749031 | Uninduced | 29.566 |
| SRR8749032 | Uninduced | 36.566 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.990 |
| SRR8400027 | Control - Root | 7.153 |