Gene detail information of Glyur006150s00043277 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G03470.2 | 9.00E-24 | Kinase interacting (KIP1-like) family protein |
| NR | XP_003554497.2 | 8.64E-53 | PREDICTED: major antigen-like [Glycine max] |
| trEMBL | tr|K7MZF8|K7MZF8_SOYBN | 3.00E-53 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G39385.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06150 | 2634 | 5856 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006150s00043277.1 | PF07765.7 | KIP1 | 72 | 131 | 8.00E-21 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.247 |
| SRR1783600 | control | 0.887 |
| SRR1783602 | moderate drought stress | 0.726 |
| SRR1811619 | moderate drought stress | 0.745 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.214 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.574 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.357 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.235 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.908 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.366 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.228 |
| SRR2868004 | Drought Stress (root) | 1.607 |
| SRR2967015 | Control (root) | 2.581 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.091 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 3.989 |
| SRR8749028 | MeJA induced 9h | 3.351 |
| SRR8749029 | MeJA induced 9h | 1.336 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.073 |
| SRR8400027 | Control - Root | 1.017 |