Gene detail

Gene detail information of Glyur006124s00045727

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G06900.1	3.00E-54	cytochrome P450, family 93, subfamily D, polypeptide 1
NR	BAG68930.1	0	cytochrome P450 monooxygenase [Glycyrrhiza uralensis]
Swissprot	tr\|Q9XHC6\|C93E1_SOYBN	4.00E-177	Beta-amyrin 24-hydroxylase
trEMBL	tr\|B5BT05\|B5BT05_GLYUR	0	Cytochrome P450 monooxygenase {ECO:0000313\|EMBL:BAG68930.1}

Sequence

Transcript Sequence

>Glyur006124s00045727.1
TCATAACTTGAAAAAGGCCATCCCTTATATTTATGTCCCTCTCCCATGATTGAAACCCTCAGCACAGGTTGAGTTGTGTCAAGTTTGGCACATATATTGTTCTGTTTTCCCTCAACTCAACCATGCTTGACATCCAAGGCTACCTCGTGCTATTCCTCTTATGGTTCATCTCAACCATTTTGATTAGATCCATCTTCAAAAAATCCCAGTGTTATANACTACCACCAGGACCCCCAATCTCTTTACCACTCATTGGACACGCTCCTTACCTTAGATCACTCCTCCACCAAGCACTCTACAAACTCTCCACCCGATATGGGCCCTTGATGCACGTCCTCATCGGTTCGCAACATGTCATCGTTGCGTCCTCTGCAGAAATGGCTAAGCAAATCCTAAAAACCTACGAGGAGTCGTTTTGCAACCGTCCGATCATGATCGCGAGCGAGAATTTGACTTACGGCGCCGCCGATTACTTCTTCATTCCATACGGAACCTACTGGAGGTTCCTTAAGAAGCTCTGCATGACAGAGCTTCTTAGNGGGAAGACGCTTGAGCACTTTGTCAATATCCGCGAGGATGAGATTNAGTGCTTCTTGAGGAATGTTCTGGAGATATCGAAGACCGGGAAAGGGGTGGAGATGAGGCAGGAGTTGATAAGGCACACAAACAACATCATTTCNAGGATGACTATGGGGAAGAAGAGTAATGGGACAAATGATGAGGTTGGTCAGGTGAGGAAGTTGGTTAGGGAGATTGGGGAACTTCTTGGTGCTTTTAACTTGGGTGACATTATTGGGTTCATGAGNCCTTTTGATCTGCAAGGGTTTGGGAAGAAGAATAGGGATGCACACCATAATATGGATGTGATGATGGAGAAGGTGCTCAAGGAGCATGAAGAGGCCCGGGCAATGGAGAAGGGTGGTGCTGAGAGTGATAGGAAGAAGGATCTATTTGACATTCTGTTGAACTTGATTGAAGCTGATGGTGCTGATAATAAACTCACTAGAGAAAGTGCCAAAGCCTTTGCACTGGTATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold06124	3677	4713	+

Gene family

Gene family	subfamily
Cytochrome P450 Family	CYP712A1

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0055114 oxidation-reduction process

molecular_function

GO:0005506 iron ion binding

GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

GO:0020037 heme binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur006124s00045727.1	PF00067.17	p450	34	301	4.90E-27

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	298.377
SRR1783600	control	298.670
SRR1783602	moderate drought stress	61.714
SRR1811619	moderate drought stress	60.517

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	147.501
DRR006520	Root Summer glycyrrhizin high producing strain	145.034
DRR006521	Root Winter glycyrrhizin high producing strain	0.108
DRR006522	Root Winter glycyrrhizin high producing strain	0.104
DRR006523	Root Summer glycyrrhizin low producing strain	20.641
DRR006524	Root Summer glycyrrhizin low producing strain	20.669
DRR006525	Leaf Summer glycyrrhizin high producing strain	2.419
DRR006526	Leaf Summer glycyrrhizin high producing strain	2.404

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	733.877
SRR2868004	Drought Stress (root)	265.378
SRR2967015	Control (root)	325.192

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	18.022
SRR9715740	Leaf	0.863
SRR9715741	Leaf	5.542
SRR9715739	Root	215.821
SRR9715742	Root	415.015
SRR9715743	Root	359.182

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	173.692
SRR8749028	MeJA induced 9h	147.251
SRR8749029	MeJA induced 9h	169.901
SRR8749030	Uninduced	90.451
SRR8749031	Uninduced	119.641
SRR8749032	Uninduced	109.643

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	250.187
SRR8400027	Control - Root	257.809