Gene detail information of Glyur006067s00042714 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G53400.1 | 6.00E-83 | HSP20-like chaperones superfamily protein |
| NR | XP_004498517.1 | 2.54E-149 | PREDICTED: protein BOBBER 1-like [Cicer arietinum] |
| Swissprot | tr|Q9LV09|BOB1_ARATH | 4.00E-117 | Protein BOBBER 1 |
| trEMBL | tr|I1KAR6|I1KAR6_SOYBN | 2.00E-138 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA06G13360.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06067 | 306 | 3276 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur006067s00042714.1 | PF04969.11 | CS | 147 | 222 | 3.90E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 144.291 |
| SRR1783600 | control | 144.514 |
| SRR1783602 | moderate drought stress | 140.941 |
| SRR1811619 | moderate drought stress | 139.829 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 135.559 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 134.872 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 125.735 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 121.863 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 171.480 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 171.063 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 21.053 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 20.857 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 108.762 |
| SRR2868004 | Drought Stress (root) | 94.636 |
| SRR2967015 | Control (root) | 90.222 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 40.163 |
| SRR9715740 | Leaf | 43.882 |
| SRR9715741 | Leaf | 52.604 |
| SRR9715739 | Root | 17.068 |
| SRR9715742 | Root | 72.982 |
| SRR9715743 | Root | 60.379 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 183.616 |
| SRR8749028 | MeJA induced 9h | 106.482 |
| SRR8749029 | MeJA induced 9h | 132.242 |
| SRR8749030 | Uninduced | 33.713 |
| SRR8749031 | Uninduced | 25.277 |
| SRR8749032 | Uninduced | 43.296 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 124.991 |
| SRR8400027 | Control - Root | 127.432 |