Gene detail information of Glyur006063s00046118 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G37080.1 | 2.00E-124 | ROP interactive partner 3 |
| NR | XP_004493948.1 | 0 | PREDICTED: interactor of constitutive active ROPs 2, chloroplastic-like isoform X1 [Cicer arietinum] |
| Swissprot | tr|Q9ZQC5|ICR2_ARATH | 2.00E-166 | Interactor of constitutive active ROPs 2, chloroplastic (Precursor) |
| trEMBL | tr|K7MYZ4|K7MYZ4_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA19G36260.7} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06063 | 467 | 3326 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.894 |
| SRR1783600 | control | 0.912 |
| SRR1783602 | moderate drought stress | 0.440 |
| SRR1811619 | moderate drought stress | 0.465 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.881 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.742 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.597 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.631 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.417 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.482 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 11.949 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 11.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 9.452 |
| SRR2868004 | Drought Stress (root) | 6.496 |
| SRR2967015 | Control (root) | 7.936 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 17.060 |
| SRR9715740 | Leaf | 8.011 |
| SRR9715741 | Leaf | 8.355 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 2.489 |
| SRR9715743 | Root | 1.996 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.799 |
| SRR8749028 | MeJA induced 9h | 1.926 |
| SRR8749029 | MeJA induced 9h | 2.627 |
| SRR8749030 | Uninduced | 0.480 |
| SRR8749031 | Uninduced | 0.150 |
| SRR8749032 | Uninduced | 0.165 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.070 |
| SRR8400027 | Control - Root | 4.151 |