Gene detail information of Glyur006032s00043490 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003623122.1 | 1.79E-09 | Ulp1 protease family C-terminal catalytic domain containing protein [Medicago truncatula] |
| trEMBL | tr|K7N3T3|K7N3T3_SOYBN | 4.00E-13 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA20G30095.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06032 | 569 | 4934 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.842 |
| SRR1783600 | control | 2.722 |
| SRR1783602 | moderate drought stress | 1.548 |
| SRR1811619 | moderate drought stress | 1.629 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.641 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.395 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 4.496 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.759 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.660 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.696 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.147 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.121 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.210 |
| SRR2868004 | Drought Stress (root) | 0.065 |
| SRR2967015 | Control (root) | 0.226 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.162 |
| SRR9715740 | Leaf | 0.479 |
| SRR9715741 | Leaf | 0.290 |
| SRR9715739 | Root | 0.825 |
| SRR9715742 | Root | 3.556 |
| SRR9715743 | Root | 3.871 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.227 |
| SRR8749028 | MeJA induced 9h | 1.263 |
| SRR8749029 | MeJA induced 9h | 1.330 |
| SRR8749030 | Uninduced | 0.904 |
| SRR8749031 | Uninduced | 0.090 |
| SRR8749032 | Uninduced | 0.250 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.293 |
| SRR8400027 | Control - Root | 2.199 |