Gene detail information of Glyur006021s00043099 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_008240491.1 | 9.44E-09 | PREDICTED: uncharacterized protein LOC103338992 [Prunus mume] |
| trEMBL | tr|M5XGK0|M5XGK0_PRUPE | 2.00E-08 | Uncharacterized protein {ECO:0000313|EMBL:EMJ20613.1} (Fragment) |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold06021 | 5932 | 6972 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.405 |
| SRR1783600 | control | 7.446 |
| SRR1783602 | moderate drought stress | 14.417 |
| SRR1811619 | moderate drought stress | 14.181 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 6.571 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 8.198 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 8.194 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 7.932 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 4.309 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 4.626 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.403 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 4.794 |
| SRR2868004 | Drought Stress (root) | 5.388 |
| SRR2967015 | Control (root) | 5.765 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 5.557 |
| SRR9715740 | Leaf | 5.802 |
| SRR9715741 | Leaf | 5.631 |
| SRR9715739 | Root | 0.618 |
| SRR9715742 | Root | 2.139 |
| SRR9715743 | Root | 1.941 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.301 |
| SRR8749028 | MeJA induced 9h | 9.343 |
| SRR8749029 | MeJA induced 9h | 2.320 |
| SRR8749030 | Uninduced | 6.953 |
| SRR8749031 | Uninduced | 1.166 |
| SRR8749032 | Uninduced | 1.713 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 28.012 |
| SRR8400027 | Control - Root | 22.544 |