Gene detail

Gene detail information of Glyur005983s00044572.1

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G63160.1	3.00E-105	BTB and TAZ domain protein 1
NR	XP_004515848.1	0	PREDICTED: BTB/POZ and TAZ domain-containing protein 2-like [Cicer arietinum]
Swissprot	tr\|Q9FMK7\|BT1_ARATH	6.00E-132	BTB/POZ and TAZ domain-containing protein 1
trEMBL	tr\|G7JMM8\|G7JMM8_MEDTR	0	BTB/POZ and TAZ domain protein {ECO:0000313\|EMBL:AES91088.1}

Sequence

Transcript Sequence

>Glyur005983s00044572.1
GACAAACAAGAGAGGAAAAAGTAAGAGACGATCGCTTTGTTGACTAACGGGAAGTGGCGCCTATTAATAATAGCGCGTGGGAAAAAAAAAAAAAGAAAAAGAACACACCACCCAAACCCAATACACACGATGCTTATTAATACCTGAAGCTGCTGAACTTTCCGCGTCGGGTCCCAAGTCCAACCTTTCCCAGATCTGTTAATAAGCTCTGCCTTAAATAACAGAAGAACGTACACTCAATTCATCTCAGAATCATCTCCTTCCTATACCCAACACCATTCTTAATTCTTCTATCAAACCCTGAAAGAAAAACAAAAAAAANCTCTCTGCAAATGGGTGCCCAAACCATACCCATCGAATTCCAAAGCACCCGGATCCTACCCGAATGTGATGTCTTTATACACACTTCCGGTGGGACGCGCATTCCAGCCCACGCTAGCATTCTGGCTTCGGTGTCGCCGGTTTTGGAGAACATGATAGATCGACCGCGTAAGCATCGGAGCTCCGAGAGAATAATCCAAATCCACGGCGTCCCTTGCGACGCCGTAACCGCCTTCGTCGGCTTCCTTTACTCCTCGAGGTGCACGGAGGAAGAGATGGACAAGTACGGGATGCACCTGCTGGCGCTGTCGCACGTGTACATGGTGCCGCAGTTGAAGCAGAGGTGCACCAAGGGGCTGGGGCAGAGGCTGACCACGGAGAACGTGGTGGACGTGCTGCAACTTGCGAGGCTCTGCGACGCACCGGATCTCCGCCTCCGTTGCATGAACCTCCTCACCAATCACTTCAAGGCGGTTGAGAAAACAGAGGGGTGGAAGTTCCTCACCAAACACGACCCCTGGCTCGAACTCGACATCCTTCGCTTCATGGACGAACGCGAAACGAGGAAAAGGAAATCGAGGAGGCATAGGGAGGAGCAGGGACTGTACGCGCAGCTGAGTGAGGCGATGGAGTGCTTGGAGCACATATGCACGGAAGGGTGCACCGACGTTGGGCCCTACCACGTGGAGGTTAATGACGGGGAGAAGAGGCCGTGCAGCAGATTCACCACGTGTCACGGGCTTCAGCTCCTGATCCGCCACTTCGCCACGTGTAAGAGGAGGGTGAAAGGAGGGTGCTGGCGGTGTAAGCGAATGTGGCAGCTCTTCCGTCTCCATTCCTACATTTGTGATCAACAAACTGATGATGATTCCTGCAAGGTTCCTCTCTGCAGGCAATTTCAATTGAGAATGCAACAAGAGAAAAGGAAAGATGATGAGAGATGGAAACTACTAGCGAGGAAGAGGAAGAGGGATGAGGAAACGAGAGTGACGATGGACAATCCTGGGATCAGAACTAGCATGAGGTTTCTGGATAGTGTGAACTTCTTGTTCCTGGCTCTTCGTTAG

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold05983	2192	6265	+

Gene family

Gene family	subfamily
Transcription Factors Family	TAZ
Ubiquitin Family	BTB
Ubiquitin Family	3-box

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006355 regulation of transcription, DNA-templated

cellular_component
GO:0005634 nucleus

molecular_function

GO:0003712 transcription cofactor activity

GO:0004402 histone acetyltransferase activity

GO:0005515 protein binding

GO:0008270 zinc ion binding

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur005983s00044572.1	PF00651.26	BTB	19	117	1.80E-13
Glyur005983s00044572.1	PF02135.11	zf-TAZ	201	293	2.10E-08

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	35.083
SRR1783600	control	35.325
SRR1783602	moderate drought stress	50.478
SRR1811619	moderate drought stress	50.015

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	47.748
DRR006520	Root Summer glycyrrhizin high producing strain	47.213
DRR006521	Root Winter glycyrrhizin high producing strain	1.734
DRR006522	Root Winter glycyrrhizin high producing strain	1.654
DRR006523	Root Summer glycyrrhizin low producing strain	68.871
DRR006524	Root Summer glycyrrhizin low producing strain	70.354
DRR006525	Leaf Summer glycyrrhizin high producing strain	15.888
DRR006526	Leaf Summer glycyrrhizin high producing strain	15.677

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	24.772
SRR2868004	Drought Stress (root)	38.379
SRR2967015	Control (root)	66.280

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	29.897
SRR9715740	Leaf	20.147
SRR9715741	Leaf	28.146
SRR9715739	Root	44.366
SRR9715742	Root	78.293
SRR9715743	Root	67.062

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	34.368
SRR8749028	MeJA induced 9h	40.924
SRR8749029	MeJA induced 9h	31.675
SRR8749030	Uninduced	34.384
SRR8749031	Uninduced	40.688
SRR8749032	Uninduced	33.506

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	32.743
SRR8400027	Control - Root	63.760