Gene detail information of Glyur005977s00044448 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003545882.1 | 6.53E-157 | PREDICTED: polyphenol oxidase A1, chloroplastic-like [Glycine max] |
| Swissprot | tr|P43309|PPO_MALDO | 3.00E-127 | Polyphenol oxidase, chloroplastic (Precursor) |
| trEMBL | tr|I1MEE6|I1MEE6_SOYBN | 2.00E-157 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA15G07710.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05977 | 4949 | 6096 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| K00422 | E1.10.3.1 | EC:1.10.3.1 | Tyrosine metabolism | map00350 |
| Isoquinoline alkaloid biosynthesis | map00950 |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005977s00044448.1 | PF00264.15 | Tyrosinase | 29 | 81 | 1.30E-15 |
| Glyur005977s00044448.1 | PF12142.3 | PPO1_DWL | 83 | 131 | 8.90E-28 |
| Glyur005977s00044448.1 | PF12143.3 | PPO1_KFDV | 160 | 287 | 6.80E-56 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 79.809 |
| SRR1783600 | control | 78.253 |
| SRR1783602 | moderate drought stress | 14.613 |
| SRR1811619 | moderate drought stress | 14.698 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 298.271 |
| SRR2868004 | Drought Stress (root) | 320.198 |
| SRR2967015 | Control (root) | 363.788 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.038 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 96.483 |
| SRR9715742 | Root | 55.780 |
| SRR9715743 | Root | 50.497 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.546 |
| SRR8749031 | Uninduced | 0.121 |
| SRR8749032 | Uninduced | 1.071 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 68.450 |
| SRR8400027 | Control - Root | 15.372 |