Gene detail information of Glyur005954s00045291 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G27110.2 | 4.00E-12 | Peptidase family M48 family protein |
| NR | XP_006599033.1 | 3.66E-33 | PREDICTED: uncharacterized protein LOC100776801 isoform X2 [Glycine max] |
| trEMBL | tr|V7CU86|V7CU86_PHAVU | 3.00E-29 | Uncharacterized protein {ECO:0000313|EMBL:ESW33727.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05954 | 417 | 2159 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 6.433 |
| SRR1783600 | control | 4.710 |
| SRR1783602 | moderate drought stress | 2.070 |
| SRR1811619 | moderate drought stress | 2.696 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.822 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.235 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.383 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 3.659 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 11.411 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 10.157 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 23.123 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 23.605 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.862 |
| SRR2868004 | Drought Stress (root) | 10.165 |
| SRR2967015 | Control (root) | 13.161 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.508 |
| SRR9715740 | Leaf | 1.549 |
| SRR9715741 | Leaf | 1.100 |
| SRR9715739 | Root | 0.052 |
| SRR9715742 | Root | 0.603 |
| SRR9715743 | Root | 0.072 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.712 |
| SRR8749028 | MeJA induced 9h | 2.580 |
| SRR8749029 | MeJA induced 9h | 0.848 |
| SRR8749030 | Uninduced | 0.851 |
| SRR8749031 | Uninduced | 0.408 |
| SRR8749032 | Uninduced | 0.985 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.259 |
| SRR8400027 | Control - Root | 1.579 |