Gene detail

Gene detail information of Glyur005915s00046385

Functional Annotation

Database	Orthologs	E value	Annotation
TAIR	AT5G51740.1	8.00E-52	Peptidase family M48 family protein
NR	XP_003534034.1	2.06E-94	PREDICTED: uncharacterized protein LOC100799127 [Glycine max]
COG	YP_004268984.1	7.00E-15	peptidase M48 Ste24p [Planctomyces brasiliensis DSM 5305]
trEMBL	tr\|I1L3I9\|I1L3I9_SOYBN	8.00E-95	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GLYMA09G27860.1}

Sequence

Transcript Sequence

>Glyur005915s00046385.1
ATGTGGCGGTACCAAAGGTTGTGCCAATCTGGGTATTCGAATTTGGGTTTGAAAGGAGCTAGCTTTTATGTGTTCTCTTTGTTTTCTTCAGTTTCTCAGAGAATAGGCACACAGAATGTTAAAGTTAACAAGAAGTTTCAAAACAAGTTTCTTGCTGGGACCAGGAGATTTTACTGTGTGGATGCTGACAATGTGCCAAGAGGGTTCAAGGATTATTTTAAGTGGCATTTTGAAACAATGCAAACCGTTCCTTACACCAAGCNAACCCGTCGTGTTGTGATGACGATAACCCATGAGAGGAGGCTTGCGGAGAGGATTTTTGAAATGACTAAGGCAGCCTTAGAGGGAAAGATATTGCCTCCAACTCACCCAGACAGTGTGAGGATGACGGTGATATTCAAGAATATCATTGATGCATTGCAGAGAGAGGTGAAGAAAATGGGGTGTGCATCAAAACATACCATGCTACATCGCATTTGGATGGGTCTGCTACGAAGGTCACAGCCTTTTACATTGCATTTGGATGGATTGAATTGGGAGGTTTTTGCAGTGAACGATCCTGAAAATTATGCCTTTTGCATACCTGGTGGTGGAAGATATTTGTATATACTGGTTGCGCATATTGTGGCCCGACACAGTGCTGAAATGATTACAAAGACAATGCAGTTTTATGTGCTACATGACATGATTAATCTATTCGTCAATGTTGATGTTCTCAAAAGAATGTCACCCATTATCTCAAAACTACCTTTCAACAGACGGATGGAAATGGAAGCTGATTACATTGGCCTTCTACTAATGGCATCAGCCGGCTATGATCCCCAACTAGCACCTAAAGTATATGAGAAGTTTGACAAGTTCGATGATATTGACGTNTCTATGCTTAAAGGTGGTTATCTGTGTAGTCATCCAACTGGAAAACAAAGAGCAGAAGCACTGGCTCGACCTAAGATAATGGAAGAAGCTCTTGTTATATATAAGGATGTAAAAACAAGATATGGGGTTGAATGA

Protein Sequence

Location information (JBrowse)

Scaffold	Start	End	Strand
Scaffold05915	4074	6405	+

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID
--	--	--	--	--

Gene Ontology

biological_process
GO:0006508 proteolysis

cellular_component
GO:0016020 membrane

molecular_function
GO:0004222 metalloendopeptidase activity

Pfam domain

Protein	Pfam accession	Pfam name	Alignment start	Alignment end	E-value
Glyur005915s00046385.1	PF01435.13	Peptidase_M48	205	311	1.40E-06

Expression pattern

SRP053019

SRA Experiment	Description	TPM
SRR1783599	control	5.144
SRR1783600	control	5.102
SRR1783602	moderate drought stress	6.495
SRR1811619	moderate drought stress	6.242

DRP000996

SRA Experiment	Description	TPM
DRR006519	Root Summer glycyrrhizin high producing strain	2.309
DRR006520	Root Summer glycyrrhizin high producing strain	2.420
DRR006521	Root Winter glycyrrhizin high producing strain	6.003
DRR006522	Root Winter glycyrrhizin high producing strain	6.130
DRR006523	Root Summer glycyrrhizin low producing strain	6.372
DRR006524	Root Summer glycyrrhizin low producing strain	6.293
DRR006525	Leaf Summer glycyrrhizin high producing strain	1.528
DRR006526	Leaf Summer glycyrrhizin high producing strain	1.462

SRP065514

SRA Experiment	Description	TPM
SRR2867873	Salt Stress (root)	4.731
SRR2868004	Drought Stress (root)	4.775
SRR2967015	Control (root)	5.761

SRP215420

SRA Experiment	Description	TPM
SRR9715738	Leaf	3.539
SRR9715740	Leaf	3.480
SRR9715741	Leaf	2.566
SRR9715739	Root	0.952
SRR9715742	Root	0.792
SRR9715743	Root	0.752

SRP188776

SRA Experiment	Description	TPM
SRR8749027	MeJA induced 9h	10.447
SRR8749028	MeJA induced 9h	6.159
SRR8749029	MeJA induced 9h	7.180
SRR8749030	Uninduced	5.530
SRR8749031	Uninduced	4.610
SRR8749032	Uninduced	3.715

SRP175571

SRA Experiment	Description	TPM
SRR8400026	NaCl treatment - Root	7.263
SRR8400027	Control - Root	7.511