Gene detail information of Glyur005880s00042244


Functional Annotation

DatabaseOrthologsE valueAnnotation
TAIRAT4G29380.12.00E-92protein kinase family protein / WD-40 repeat family protein
NRXP_004513131.15.59E-114PREDICTED: probable serine/threonine-protein kinase vps15-like [Cicer arietinum]
COGYP_001103533.12.00E-07protein kinase [Saccharopolyspora erythraea NRRL 2338]
Swissprottr|Q4V3C8|PDPK2_ARATH1.00E-073-phosphoinositide-dependent protein kinase 2
trEMBLtr|A0A072UMY9|A0A072UMY9_MEDTR4.00E-114Phosphoinositide 3-kinase regulatory subunit-like protein {ECO:0000313|EMBL:KEH27225.1}

Sequence

Transcript Sequence
Protein Sequence


Location information (JBrowse)

ScaffoldStartEndStrand
Scaffold0588039515597+


Gene family

Gene familysubfamily
Protein Kinases FamilyPPC:5.2.1


KEGG pathway

KOEnzymeEnzyme IDpathwaymapID
K08333PIK3R4, VPS15EC:2.7.11.1Autophagy - animalmap04140
Autophagy - yeastmap04138


Gene Ontology

biological_process

GO:0006468  protein phosphorylation


molecular_function

GO:0004672  protein kinase activity

GO:0005524  ATP binding

GO:0016772  transferase activity, transferring phosphorus-containing groups



Pfam domain

ProteinPfam accessionPfam nameAlignment startAlignment endE-value
Glyur005880s00042244.1PF00069.20Pkinase291694.50E-16


Expression pattern

SRP053019

SRA ExperimentDescriptionTPM
SRR1783599control21.252
SRR1783600control16.367
SRR1783602moderate drought stress5.750
SRR1811619moderate drought stress6.905

DRP000996

SRA ExperimentDescriptionTPM
DRR006519Root Summer glycyrrhizin high producing strain2.777
DRR006520Root Summer glycyrrhizin high producing strain2.383
DRR006521Root Winter glycyrrhizin high producing strain1.739
DRR006522Root Winter glycyrrhizin high producing strain1.403
DRR006523Root Summer glycyrrhizin low producing strain1.672
DRR006524Root Summer glycyrrhizin low producing strain1.792
DRR006525Leaf Summer glycyrrhizin high producing strain1.876
DRR006526Leaf Summer glycyrrhizin high producing strain2.231

SRP065514

SRA ExperimentDescriptionTPM
SRR2867873Salt Stress (root)7.412
SRR2868004Drought Stress (root)9.051
SRR2967015Control (root)12.195

SRP215420

SRA ExperimentDescriptionTPM
SRR9715738Leaf3.973
SRR9715740Leaf3.876
SRR9715741Leaf2.618
SRR9715739Root1.674
SRR9715742Root6.856
SRR9715743Root6.323

SRP188776

SRA ExperimentDescriptionTPM
SRR8749027MeJA induced 9h2.566
SRR8749028MeJA induced 9h6.036
SRR8749029MeJA induced 9h0.364
SRR8749030Uninduced0.869
SRR8749031Uninduced1.743
SRR8749032Uninduced0.235

SRP175571

SRA ExperimentDescriptionTPM
SRR8400026NaCl treatment - Root30.576
SRR8400027Control - Root25.225

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State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University. All rights reserved