Gene detail information of Glyur005866s00044460 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G22120.1 | 5.00E-72 | |
| NR | KHN19926.1 | 7.90E-164 | Growth inhibition and differentiation-related protein 88 like [Glycine soja] |
| trEMBL | tr|I1LKM0|I1LKM0_SOYBN | 3.00E-164 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G18240.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05866 | 354 | 4282 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 15.340 |
| SRR1783600 | control | 15.582 |
| SRR1783602 | moderate drought stress | 13.883 |
| SRR1811619 | moderate drought stress | 13.880 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 16.229 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 16.251 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 15.587 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 15.232 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 6.175 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 6.070 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 13.380 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 13.727 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 11.926 |
| SRR2868004 | Drought Stress (root) | 15.684 |
| SRR2967015 | Control (root) | 13.002 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.709 |
| SRR9715740 | Leaf | 10.723 |
| SRR9715741 | Leaf | 18.984 |
| SRR9715739 | Root | 4.983 |
| SRR9715742 | Root | 8.992 |
| SRR9715743 | Root | 6.933 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 10.442 |
| SRR8749028 | MeJA induced 9h | 4.486 |
| SRR8749029 | MeJA induced 9h | 4.027 |
| SRR8749030 | Uninduced | 5.515 |
| SRR8749031 | Uninduced | 2.752 |
| SRR8749032 | Uninduced | 2.764 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.559 |
| SRR8400027 | Control - Root | 33.181 |