Gene detail information of Glyur005856s00046181 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KHN40185.1 | 6.79E-16 | Nucleolar complex protein 2 like [Glycine soja] |
| trEMBL | tr|V7C0Y4|V7C0Y4_PHAVU | 4.00E-16 | Uncharacterized protein {ECO:0000313|EMBL:ESW23784.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05856 | 5568 | 7479 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.427 |
| SRR1783600 | control | 0.460 |
| SRR1783602 | moderate drought stress | 0.395 |
| SRR1811619 | moderate drought stress | 0.325 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.447 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.341 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.482 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.351 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.570 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.419 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.386 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.536 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.234 |
| SRR2868004 | Drought Stress (root) | 1.037 |
| SRR2967015 | Control (root) | 0.555 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.563 |
| SRR9715740 | Leaf | 0.924 |
| SRR9715741 | Leaf | 0.595 |
| SRR9715739 | Root | 0.166 |
| SRR9715742 | Root | 0.773 |
| SRR9715743 | Root | 0.337 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.574 |
| SRR8749028 | MeJA induced 9h | 10.227 |
| SRR8749029 | MeJA induced 9h | 3.183 |
| SRR8749030 | Uninduced | 1.926 |
| SRR8749031 | Uninduced | 1.095 |
| SRR8749032 | Uninduced | 1.029 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.578 |
| SRR8400027 | Control - Root | 1.690 |