Gene detail information of Glyur005851s00047833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G22490.1 | 8.00E-24 | Seed maturation protein |
| NR | XP_004495777.1 | 7.39E-44 | PREDICTED: late embryogenesis abundant protein D-34-like isoform X2 [Cicer arietinum] |
| Swissprot | tr|P09444|LEA34_GOSHI | 2.00E-41 | Late embryogenesis abundant protein D-34 |
| trEMBL | tr|D7T6Y9|D7T6Y9_VITVI | 1.00E-43 | Putative uncharacterized protein {ECO:0000313|EMBL:CBI26260.3} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05851 | 3081 | 3404 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005851s00047833.1 | PF04927.7 | SMP | 14 | 70 | 6.20E-17 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.000 |
| SRR1783600 | control | 0.000 |
| SRR1783602 | moderate drought stress | 0.118 |
| SRR1811619 | moderate drought stress | 0.117 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.341 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.209 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 0.122 |
| SRR2868004 | Drought Stress (root) | 0.000 |
| SRR2967015 | Control (root) | 0.312 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 9.118 |
| SRR8749028 | MeJA induced 9h | 4.984 |
| SRR8749029 | MeJA induced 9h | 5.988 |
| SRR8749030 | Uninduced | 4.746 |
| SRR8749031 | Uninduced | 7.284 |
| SRR8749032 | Uninduced | 8.470 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 0.084 |
| SRR8400027 | Control - Root | 0.000 |