Gene detail information of Glyur005832s00043834 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G27830.1 | 3.00E-23 | |
| NR | XP_003538723.1 | 3.12E-60 | PREDICTED: uncharacterized protein LOC100803628 [Glycine max] |
| Swissprot | tr|Q56XJ7|Y4276_ARATH | 2.00E-09 | Uncharacterized protein At4g22758 |
| trEMBL | tr|I1LGK8|I1LGK8_SOYBN | 1.00E-60 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03190.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05832 | 5524 | 7266 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 4.881 |
| SRR1783600 | control | 4.857 |
| SRR1783602 | moderate drought stress | 3.658 |
| SRR1811619 | moderate drought stress | 3.266 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.342 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.515 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.122 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.006 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.694 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.368 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.987 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 5.146 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.537 |
| SRR2868004 | Drought Stress (root) | 2.026 |
| SRR2967015 | Control (root) | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 4.578 |
| SRR9715740 | Leaf | 4.412 |
| SRR9715741 | Leaf | 3.844 |
| SRR9715739 | Root | 1.812 |
| SRR9715742 | Root | 2.103 |
| SRR9715743 | Root | 2.367 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1.199 |
| SRR8749028 | MeJA induced 9h | 0.592 |
| SRR8749029 | MeJA induced 9h | 0.362 |
| SRR8749030 | Uninduced | 0.178 |
| SRR8749031 | Uninduced | 0.057 |
| SRR8749032 | Uninduced | 0.217 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.892 |
| SRR8400027 | Control - Root | 3.023 |