Gene detail information of Glyur005832s00043833 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22758.1 | 5.00E-29 | |
| NR | XP_003538594.1 | 1.93E-105 | PREDICTED: uncharacterized protein At4g22758-like isoform X1 [Glycine max] |
| Swissprot | tr|Q56XJ7|Y4276_ARATH | 8.00E-34 | Uncharacterized protein At4g22758 |
| trEMBL | tr|I1LGK9|I1LGK9_SOYBN | 7.00E-106 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA11G03200.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05832 | 462 | 4380 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 3.123 |
| SRR1783600 | control | 3.222 |
| SRR1783602 | moderate drought stress | 2.671 |
| SRR1811619 | moderate drought stress | 2.607 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 5.064 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 4.730 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.114 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.223 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 7.610 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 7.001 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.810 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 1.157 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.324 |
| SRR2868004 | Drought Stress (root) | 9.926 |
| SRR2967015 | Control (root) | 10.464 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 3.958 |
| SRR9715740 | Leaf | 1.478 |
| SRR9715741 | Leaf | 3.601 |
| SRR9715739 | Root | 2.758 |
| SRR9715742 | Root | 7.698 |
| SRR9715743 | Root | 3.902 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.305 |
| SRR8749028 | MeJA induced 9h | 1.095 |
| SRR8749029 | MeJA induced 9h | 0.532 |
| SRR8749030 | Uninduced | 0.610 |
| SRR8749031 | Uninduced | 0.345 |
| SRR8749032 | Uninduced | 0.058 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 5.863 |
| SRR8400027 | Control - Root | 4.413 |