Gene detail information of Glyur005825s00043820 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | KDP43483.1 | 2.23E-09 | hypothetical protein JCGZ_16770 [Jatropha curcas] |
| Swissprot | tr|Q8GW29|LOG7_ARATH | 4.00E-08 | Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG7 |
| trEMBL | tr|A0A067L8A3|A0A067L8A3_JATCU | 8.00E-10 | Uncharacterized protein {ECO:0000313|EMBL:KDP43483.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05825 | 181 | 1375 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.102 |
| SRR1783600 | control | 1.226 |
| SRR1783602 | moderate drought stress | 1.076 |
| SRR1811619 | moderate drought stress | 0.800 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.633 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.833 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 3.878 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.699 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.747 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.494 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.111 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.430 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 6.869 |
| SRR2868004 | Drought Stress (root) | 6.846 |
| SRR2967015 | Control (root) | 7.017 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.042 |
| SRR9715740 | Leaf | 4.012 |
| SRR9715741 | Leaf | 2.078 |
| SRR9715739 | Root | 1.036 |
| SRR9715742 | Root | 0.366 |
| SRR9715743 | Root | 0.939 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.386 |
| SRR8749028 | MeJA induced 9h | 0.409 |
| SRR8749029 | MeJA induced 9h | 0.108 |
| SRR8749030 | Uninduced | 0.167 |
| SRR8749031 | Uninduced | 0.073 |
| SRR8749032 | Uninduced | 0.032 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.336 |
| SRR8400027 | Control - Root | 2.160 |