Gene detail information of Glyur005820s00040145 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G48770.1 | 5.00E-107 | DNA binding;ATP binding |
| NR | KEH20821.1 | 0 | ATP/DNA-binding protein [Medicago truncatula] |
| trEMBL | tr|A0A072TUH8|A0A072TUH8_MEDTR | 0 | ATP/DNA-binding protein {ECO:0000313|EMBL:KEH20821.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05820 | 6180 | 7751 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.974 |
| SRR1783600 | control | 6.043 |
| SRR1783602 | moderate drought stress | 4.699 |
| SRR1811619 | moderate drought stress | 5.014 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.568 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.696 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.071 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.069 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 27.225 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 26.914 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 16.057 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 15.790 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.241 |
| SRR2868004 | Drought Stress (root) | 12.409 |
| SRR2967015 | Control (root) | 11.091 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.593 |
| SRR9715740 | Leaf | 0.475 |
| SRR9715741 | Leaf | 0.330 |
| SRR9715739 | Root | 0.124 |
| SRR9715742 | Root | 2.463 |
| SRR9715743 | Root | 1.883 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 11.544 |
| SRR8749028 | MeJA induced 9h | 2.130 |
| SRR8749029 | MeJA induced 9h | 3.131 |
| SRR8749030 | Uninduced | 0.071 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.109 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.124 |
| SRR8400027 | Control - Root | 0.878 |