Gene detail information of Glyur005806s00045404.1 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G61040.1 | 1.00E-49 | cytochrome P450, family 76, subfamily C, polypeptide 7 |
| NR | XP_004496164.1 | 1.83E-166 | PREDICTED: geraniol 8-hydroxylase-like [Cicer arietinum] |
| COG | YP_004676310.1 | 4.00E-09 | cytochrome P450 family protein [Hyphomicrobium sp. MC1] |
| Swissprot | tr|Q8VWZ7|C76B6_CATRO | 1.00E-81 | Geraniol 8-hydroxylase |
| trEMBL | tr|A0A072VPS7|A0A072VPS7_MEDTR | 1.00E-165 | Cytochrome P450 family protein {ECO:0000313|EMBL:KEH43383.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05806 | 3 | 1389 | - |
Gene family
| Gene family | subfamily |
|---|---|
| Cytochrome P450 Family | CYP76C7 |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005806s00045404.1 | PF00067.17 | p450 | 38 | 183 | 4.70E-16 |
| Glyur005806s00045404.1 | PF00067.17 | p450 | 184 | 313 | 1.90E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.920 |
| SRR1783600 | control | 0.772 |
| SRR1783602 | moderate drought stress | 0.501 |
| SRR1811619 | moderate drought stress | 0.319 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.988 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.930 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.463 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.233 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.612 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 2.975 |
| SRR2868004 | Drought Stress (root) | 0.477 |
| SRR2967015 | Control (root) | 2.185 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.450 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.103 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 0.000 |
| SRR9715743 | Root | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 1.292 |
| SRR8400027 | Control - Root | 0.629 |