Gene detail information of Glyur005792s00043078 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G61960.2 | 6.00E-04 | MEI2-like protein 1 |
| NR | AES73001.2 | 1.32E-17 | RNA recognition motif 1 in plant MEI2-like protein [Medicago truncatula] |
| trEMBL | tr|G7J3A0|G7J3A0_MEDTR | 5.00E-18 | RNA recognition motif 1 in plant MEI2-like protein {ECO:0000313|EMBL:AES73001.2} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05792 | 5575 | 7084 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.315 |
| SRR1783600 | control | 8.151 |
| SRR1783602 | moderate drought stress | 9.217 |
| SRR1811619 | moderate drought stress | 8.578 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 2.526 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 2.090 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 1.232 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 1.537 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.693 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 1.467 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.855 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.053 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 18.509 |
| SRR2868004 | Drought Stress (root) | 16.339 |
| SRR2967015 | Control (root) | 18.329 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 10.481 |
| SRR9715740 | Leaf | 8.278 |
| SRR9715741 | Leaf | 10.965 |
| SRR9715739 | Root | 2.024 |
| SRR9715742 | Root | 12.372 |
| SRR9715743 | Root | 13.487 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 2.802 |
| SRR8749028 | MeJA induced 9h | 9.744 |
| SRR8749029 | MeJA induced 9h | 2.205 |
| SRR8749030 | Uninduced | 1.786 |
| SRR8749031 | Uninduced | 1.808 |
| SRR8749032 | Uninduced | 0.876 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 24.626 |
| SRR8400027 | Control - Root | 24.223 |