Gene detail information of Glyur005777s00041579 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G30880.1 | 5.00E-106 | Pleckstrin homology (PH) domain-containing protein |
| NR | XP_003545261.1 | 0 | PREDICTED: nucleoporin nup211-like [Glycine max] |
| trEMBL | tr|I1M6Z7|I1M6Z7_SOYBN | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G03430.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05777 | 818 | 6118 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 8.578 |
| SRR1783600 | control | 8.621 |
| SRR1783602 | moderate drought stress | 7.387 |
| SRR1811619 | moderate drought stress | 7.570 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 15.929 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 15.015 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 13.831 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 13.706 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 16.703 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 15.656 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 4.423 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 4.438 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 14.131 |
| SRR2868004 | Drought Stress (root) | 15.386 |
| SRR2967015 | Control (root) | 14.938 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 7.500 |
| SRR9715740 | Leaf | 9.358 |
| SRR9715741 | Leaf | 8.936 |
| SRR9715739 | Root | 1.829 |
| SRR9715742 | Root | 7.316 |
| SRR9715743 | Root | 5.568 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 21.886 |
| SRR8749028 | MeJA induced 9h | 25.260 |
| SRR8749029 | MeJA induced 9h | 16.412 |
| SRR8749030 | Uninduced | 43.150 |
| SRR8749031 | Uninduced | 24.209 |
| SRR8749032 | Uninduced | 12.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 17.222 |
| SRR8400027 | Control - Root | 15.543 |