Gene detail information of Glyur005775s00047864 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_002982842.1 | 1.47E-10 | hypothetical protein SELMODRAFT_422106 [Selaginella moellendorffii] |
| trEMBL | tr|D8RUV9|D8RUV9_SELML | 3.00E-12 | Putative uncharacterized protein {ECO:0000313|EMBL:EFJ24090.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05775 | 4864 | 5379 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 103.774 |
| SRR1783600 | control | 106.201 |
| SRR1783602 | moderate drought stress | 169.623 |
| SRR1811619 | moderate drought stress | 177.422 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.649 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.492 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.901 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.477 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 30.452 |
| SRR2868004 | Drought Stress (root) | 19.405 |
| SRR2967015 | Control (root) | 2.183 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.000 |
| SRR9715740 | Leaf | 7.274 |
| SRR9715741 | Leaf | 0.526 |
| SRR9715739 | Root | 165.216 |
| SRR9715742 | Root | 36.975 |
| SRR9715743 | Root | 58.767 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.130 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.639 |
| SRR8749031 | Uninduced | 0.280 |
| SRR8749032 | Uninduced | 0.275 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 38.687 |
| SRR8400027 | Control - Root | 12.412 |