Gene detail information of Glyur005765s00043966 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT2G31110.2 | 6.00E-23 | Plant protein of unknown function (DUF828) |
| NR | ABA29157.1 | 2.56E-39 | unknown [Pisum sativum] |
| Swissprot | tr|Q67XC4|TBL40_ARATH | 2.00E-27 | Protein trichome birefringence-like 40 |
| trEMBL | tr|Q3LSN3|Q3LSN3_PEA | 1.00E-39 | Putative uncharacterized protein {ECO:0000313|EMBL:ABA29157.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05765 | 14 | 217 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005765s00043966.1 | PF13839.1 | PC-Esterase | 5 | 65 | 2.40E-18 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.216 |
| SRR1783600 | control | 0.371 |
| SRR1783602 | moderate drought stress | 0.212 |
| SRR1811619 | moderate drought stress | 0.295 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 4.002 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.488 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 5.415 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.122 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 9.516 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.446 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 26.501 |
| SRR2868004 | Drought Stress (root) | 11.958 |
| SRR2967015 | Control (root) | 25.441 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 50.029 |
| SRR9715740 | Leaf | 29.811 |
| SRR9715741 | Leaf | 76.466 |
| SRR9715739 | Root | 4.650 |
| SRR9715742 | Root | 6.059 |
| SRR9715743 | Root | 7.572 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 82.973 |
| SRR8749028 | MeJA induced 9h | 117.571 |
| SRR8749029 | MeJA induced 9h | 319.209 |
| SRR8749030 | Uninduced | 172.401 |
| SRR8749031 | Uninduced | 183.916 |
| SRR8749032 | Uninduced | 549.138 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 2.461 |
| SRR8400027 | Control - Root | 5.932 |