Gene detail information of Glyur005760s00046998 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT5G23950.1 | 6.00E-39 | Calcium-dependent lipid-binding (CaLB domain) family protein |
| NR | ACJ84898.1 | 2.84E-122 | unknown [Medicago truncatula] |
| trEMBL | tr|I1L340|I1L340_SOYBN | 1.00E-128 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA09G24890.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05760 | 5282 | 6531 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005760s00046998.1 | PF00168.25 | C2 | 10 | 88 | 5.10E-07 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 141.323 |
| SRR1783600 | control | 141.073 |
| SRR1783602 | moderate drought stress | 124.670 |
| SRR1811619 | moderate drought stress | 124.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 87.724 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 86.640 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 59.249 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 58.155 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 131.433 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 130.991 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 63.602 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 63.946 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 382.360 |
| SRR2868004 | Drought Stress (root) | 285.998 |
| SRR2967015 | Control (root) | 211.150 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 98.522 |
| SRR9715740 | Leaf | 77.446 |
| SRR9715741 | Leaf | 135.763 |
| SRR9715739 | Root | 210.433 |
| SRR9715742 | Root | 179.736 |
| SRR9715743 | Root | 183.236 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 1207.019 |
| SRR8749028 | MeJA induced 9h | 649.211 |
| SRR8749029 | MeJA induced 9h | 784.943 |
| SRR8749030 | Uninduced | 155.770 |
| SRR8749031 | Uninduced | 113.525 |
| SRR8749032 | Uninduced | 297.839 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 111.314 |
| SRR8400027 | Control - Root | 108.609 |