Gene detail information of Glyur005750s00044398 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT3G16150.1 | 9.00E-66 | N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein |
| NR | XP_004499019.1 | 1.32E-90 | PREDICTED: probable isoaspartyl peptidase/L-asparaginase 2-like [Cicer arietinum] |
| COG | YP_003715509.1 | 3.00E-35 | asparaginase [Croceibacter atlanticus HTCC2559] |
| Swissprot | tr|Q8GXG1|ASPGB_ARATH | 6.00E-81 | Isoaspartyl peptidase/L-asparaginase 2 subunit beta (Precursor) |
| trEMBL | tr|I1M8R2|I1M8R2_SOYBN | 4.00E-91 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA14G09510.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05750 | 6875 | 7306 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005750s00044398.1 | PF01112.13 | Asparaginase_2 | 12 | 137 | 6.30E-49 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.199 |
| SRR1783600 | control | 60.073 |
| SRR1783602 | moderate drought stress | 26.930 |
| SRR1811619 | moderate drought stress | 29.445 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 72.390 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 72.911 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 162.400 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 161.491 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 89.852 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 89.829 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 458.214 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 453.495 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 481.502 |
| SRR2868004 | Drought Stress (root) | 350.818 |
| SRR2967015 | Control (root) | 396.781 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 721.860 |
| SRR9715740 | Leaf | 339.170 |
| SRR9715741 | Leaf | 504.963 |
| SRR9715739 | Root | 216.669 |
| SRR9715742 | Root | 315.064 |
| SRR9715743 | Root | 281.090 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 56.343 |
| SRR8749028 | MeJA induced 9h | 58.813 |
| SRR8749029 | MeJA induced 9h | 236.184 |
| SRR8749030 | Uninduced | 199.097 |
| SRR8749031 | Uninduced | 111.634 |
| SRR8749032 | Uninduced | 277.637 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 564.641 |
| SRR8400027 | Control - Root | 658.585 |