Gene detail information of Glyur005750s00044396 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G34215.2 | 3.00E-12 | Domain of unknown function (DUF303) |
| NR | ABD32612.1 | 1.03E-24 | hypothetical protein MtrDRAFT_AC150207g2v2 [Medicago truncatula] |
| Swissprot | tr|Q8L9J9|CAES_ARATH | 2.00E-14 | Probable carbohydrate esterase At4g34215 |
| trEMBL | tr|Q2HRI3|Q2HRI3_MEDTR | 4.00E-25 | Putative uncharacterized protein {ECO:0000313|EMBL:ABD33290.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05750 | 457 | 845 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 13.357 |
| SRR1783600 | control | 14.401 |
| SRR1783602 | moderate drought stress | 8.344 |
| SRR1811619 | moderate drought stress | 9.687 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 3.191 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 3.184 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 1.716 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 2.059 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.182 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.182 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 7.133 |
| SRR2868004 | Drought Stress (root) | 11.465 |
| SRR2967015 | Control (root) | 5.771 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.421 |
| SRR9715740 | Leaf | 0.017 |
| SRR9715741 | Leaf | 0.000 |
| SRR9715739 | Root | 2.527 |
| SRR9715742 | Root | 7.347 |
| SRR9715743 | Root | 4.697 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.115 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.344 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.061 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 30.555 |
| SRR8400027 | Control - Root | 49.534 |