Gene detail information of Glyur005744s00045741 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_003622895.1 | 2.29E-132 | TMV resistance protein N [Medicago truncatula] |
| trEMBL | tr|G7L084|G7L084_MEDTR | 9.00E-133 | Disease resistance protein (TIR-NBS-LRR class), putative {ECO:0000313|EMBL:AES79113.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05744 | 923 | 7383 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 10.690 |
| SRR1783600 | control | 10.347 |
| SRR1783602 | moderate drought stress | 4.329 |
| SRR1811619 | moderate drought stress | 4.452 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.000 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 8.761 |
| SRR2868004 | Drought Stress (root) | 12.795 |
| SRR2967015 | Control (root) | 7.193 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 0.140 |
| SRR9715740 | Leaf | 0.000 |
| SRR9715741 | Leaf | 0.707 |
| SRR9715739 | Root | 0.311 |
| SRR9715742 | Root | 1.208 |
| SRR9715743 | Root | 1.558 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 4.339 |
| SRR8749028 | MeJA induced 9h | 6.643 |
| SRR8749029 | MeJA induced 9h | 2.898 |
| SRR8749030 | Uninduced | 1.881 |
| SRR8749031 | Uninduced | 2.144 |
| SRR8749032 | Uninduced | 0.919 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 13.345 |
| SRR8400027 | Control - Root | 11.997 |