Gene detail information of Glyur005726s00046101 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G63410.1 | 5.00E-34 | Protein of unknown function (DUF567) |
| NR | ACU20496.1 | 5.84E-109 | unknown [Glycine max] |
| Swissprot | tr|Q9SH27|LOR4_ARATH | 1.00E-44 | Protein LURP-one-related 4 |
| trEMBL | tr|C6TF94|C6TF94_SOYBN | 2.00E-109 | Putative uncharacterized protein {ECO:0000313|EMBL:ACU20496.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05726 | 5459 | 6568 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005726s00046101.1 | PF04525.7 | Tub_2 | 14 | 192 | 2.00E-37 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 0.179 |
| SRR1783600 | control | 0.156 |
| SRR1783602 | moderate drought stress | 0.100 |
| SRR1811619 | moderate drought stress | 0.097 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.710 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.687 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 0.000 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 6.729 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 6.245 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 13.180 |
| SRR2868004 | Drought Stress (root) | 42.842 |
| SRR2967015 | Control (root) | 43.803 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 11.990 |
| SRR9715740 | Leaf | 19.019 |
| SRR9715741 | Leaf | 8.800 |
| SRR9715739 | Root | 0.152 |
| SRR9715742 | Root | 1.415 |
| SRR9715743 | Root | 1.521 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 6.081 |
| SRR8749028 | MeJA induced 9h | 62.147 |
| SRR8749029 | MeJA induced 9h | 4.398 |
| SRR8749030 | Uninduced | 23.565 |
| SRR8749031 | Uninduced | 132.602 |
| SRR8749032 | Uninduced | 48.948 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 4.636 |
| SRR8400027 | Control - Root | 3.365 |