Gene detail information of Glyur005717s00047710 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| NR | XP_007010749.1 | 3.16E-08 | T6D22.19, putative [Theobroma cacao] |
| trEMBL | tr|A0A061FXL9|A0A061FXL9_THECC | 1.00E-08 | T6D22.19, putative {ECO:0000313|EMBL:EOY19559.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05717 | 7641 | 7808 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 2.996 |
| SRR1783600 | control | 3.000 |
| SRR1783602 | moderate drought stress | 6.600 |
| SRR1811619 | moderate drought stress | 6.538 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 0.474 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 0.576 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.782 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 2.341 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 2.834 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.637 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 1.058 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.999 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.477 |
| SRR2868004 | Drought Stress (root) | 15.167 |
| SRR2967015 | Control (root) | 16.849 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.239 |
| SRR9715740 | Leaf | 1.075 |
| SRR9715741 | Leaf | 3.117 |
| SRR9715739 | Root | 0.000 |
| SRR9715742 | Root | 1.658 |
| SRR9715743 | Root | 2.143 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.000 |
| SRR8749028 | MeJA induced 9h | 0.000 |
| SRR8749029 | MeJA induced 9h | 0.000 |
| SRR8749030 | Uninduced | 0.000 |
| SRR8749031 | Uninduced | 0.000 |
| SRR8749032 | Uninduced | 0.000 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 7.816 |
| SRR8400027 | Control - Root | 9.152 |