Gene detail information of Glyur005677s00045344 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G13360.1 | 3.00E-10 | |
| NR | XP_004512861.1 | 1.69E-82 | PREDICTED: uncharacterized protein LOC101506707 [Cicer arietinum] |
| trEMBL | tr|I3SSG8|I3SSG8_MEDTR | 4.00E-72 | Uncharacterized protein {ECO:0000313|EMBL:AFK43210.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05677 | 653 | 1574 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 60.604 |
| SRR1783600 | control | 60.675 |
| SRR1783602 | moderate drought stress | 66.577 |
| SRR1811619 | moderate drought stress | 66.432 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 54.356 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 53.481 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 64.503 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 62.050 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 45.322 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 42.977 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 19.593 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 19.582 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 47.165 |
| SRR2868004 | Drought Stress (root) | 46.441 |
| SRR2967015 | Control (root) | 45.428 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 15.834 |
| SRR9715740 | Leaf | 18.461 |
| SRR9715741 | Leaf | 27.986 |
| SRR9715739 | Root | 30.629 |
| SRR9715742 | Root | 32.384 |
| SRR9715743 | Root | 32.307 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 44.162 |
| SRR8749028 | MeJA induced 9h | 85.487 |
| SRR8749029 | MeJA induced 9h | 84.627 |
| SRR8749030 | Uninduced | 138.373 |
| SRR8749031 | Uninduced | 147.945 |
| SRR8749032 | Uninduced | 247.277 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 39.948 |
| SRR8400027 | Control - Root | 38.503 |