Gene detail information of Glyur005661s00042570 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT1G70770.2 | 1.00E-137 | Protein of unknown function DUF2359, transmembrane |
| NR | XP_003519334.1 | 0 | PREDICTED: uncharacterized protein LOC100795617 isoform 1 [Glycine max] |
| trEMBL | tr|V7B8H9|V7B8H9_PHAVU | 0 | Uncharacterized protein {ECO:0000313|EMBL:ESW13895.1} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05661 | 2110 | 7096 | + |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
| Not hits found. |
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| Glyur005661s00042570.1 | PF10151.4 | DUF2359 | 281 | 573 | 5.70E-20 |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 5.053 |
| SRR1783600 | control | 5.089 |
| SRR1783602 | moderate drought stress | 4.412 |
| SRR1811619 | moderate drought stress | 4.488 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 11.402 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 11.350 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 52.464 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 51.539 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 21.332 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 21.358 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 2.391 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 2.372 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 17.722 |
| SRR2868004 | Drought Stress (root) | 16.331 |
| SRR2967015 | Control (root) | 22.339 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 6.072 |
| SRR9715740 | Leaf | 6.115 |
| SRR9715741 | Leaf | 10.628 |
| SRR9715739 | Root | 5.438 |
| SRR9715742 | Root | 21.453 |
| SRR9715743 | Root | 17.414 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 76.037 |
| SRR8749028 | MeJA induced 9h | 253.213 |
| SRR8749029 | MeJA induced 9h | 177.339 |
| SRR8749030 | Uninduced | 90.835 |
| SRR8749031 | Uninduced | 227.859 |
| SRR8749032 | Uninduced | 194.774 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 16.408 |
| SRR8400027 | Control - Root | 13.385 |