Gene detail information of Glyur005652s00045747 |
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| TAIR | AT4G22860.1 | 3.00E-21 | Cell cycle regulated microtubule associated protein |
| NR | XP_004515753.1 | 1.98E-85 | PREDICTED: protein TPX2-like isoform X6 [Cicer arietinum] |
| Swissprot | tr|F4I2H7|TPX2_ARATH | 1.00E-09 | Protein TPX2 |
| trEMBL | tr|K7MLI9|K7MLI9_SOYBN | 2.00E-78 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GLYMA17G14600.5} |
Sequence
| Transcript Sequence |
|---|
| Protein Sequence |
|---|
Location information (JBrowse)
| Scaffold | Start | End | Strand |
|---|---|---|---|
| Scaffold05652 | 596 | 3253 | - |
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | Enzyme ID | pathway | mapID |
|---|---|---|---|---|
| -- | -- | -- | -- | -- |
Gene Ontology
|
Pfam domain
| Protein | Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|---|
| -- | -- | -- | -- | -- | -- |
Expression pattern
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR1783599 | control | 1.615 |
| SRR1783600 | control | 1.674 |
| SRR1783602 | moderate drought stress | 4.082 |
| SRR1811619 | moderate drought stress | 4.201 |
| SRA Experiment | Description | TPM |
|---|---|---|
| DRR006519 | Root Summer glycyrrhizin high producing strain | 1.786 |
| DRR006520 | Root Summer glycyrrhizin high producing strain | 1.913 |
| DRR006521 | Root Winter glycyrrhizin high producing strain | 0.152 |
| DRR006522 | Root Winter glycyrrhizin high producing strain | 0.000 |
| DRR006523 | Root Summer glycyrrhizin low producing strain | 3.263 |
| DRR006524 | Root Summer glycyrrhizin low producing strain | 3.068 |
| DRR006525 | Leaf Summer glycyrrhizin high producing strain | 0.638 |
| DRR006526 | Leaf Summer glycyrrhizin high producing strain | 0.509 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR2867873 | Salt Stress (root) | 1.570 |
| SRR2868004 | Drought Stress (root) | 0.743 |
| SRR2967015 | Control (root) | 1.237 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR9715738 | Leaf | 1.476 |
| SRR9715740 | Leaf | 0.703 |
| SRR9715741 | Leaf | 0.797 |
| SRR9715739 | Root | 1.003 |
| SRR9715742 | Root | 1.995 |
| SRR9715743 | Root | 1.356 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8749027 | MeJA induced 9h | 0.761 |
| SRR8749028 | MeJA induced 9h | 0.744 |
| SRR8749029 | MeJA induced 9h | 0.132 |
| SRR8749030 | Uninduced | 0.020 |
| SRR8749031 | Uninduced | 0.134 |
| SRR8749032 | Uninduced | 0.243 |
| SRA Experiment | Description | TPM |
|---|---|---|
| SRR8400026 | NaCl treatment - Root | 3.370 |
| SRR8400027 | Control - Root | 3.765 |